Fish shaped domain, represented by four MacroElements. Shape is parametrised by GeomObject that represents the fish's back. More...

#include <fish_domain.h>

Inheritance diagram for oomph::FishDomain:

Public Member Functions
	FishDomain (GeomObject *back_pt, const double &xi_nose, const double &xi_tail)
	Constructor: Pass pointer to GeomObject that represents the (upper) curved boundary of the fish's body, and the start and end values of the Lagrangian coordinates along the GeomObject. More...

	FishDomain (const FishDomain &)
	Broken copy constructor. More...

void	operator= (const FishDomain &)
	Broken assignment operator. More...

virtual	~FishDomain ()
	Destructor for FishDomain: Kill macro elements. More...

double &	x_fin ()
	x-position of fin tip More...

double &	y_fin ()
	y-position of fin tip More...

double &	x_mouth ()
	x-position of mouth More...

double &	xi_nose ()
	Start coordinate on wall (near nose) More...

double &	xi_tail ()
	End coordinate on wall (near tail) More...

void	macro_element_boundary (const unsigned &t, const unsigned &i_macro, const unsigned &i_direct, const Vector< double > &zeta, Vector< double > &r)
	Vector representation of the i_macro-th macro element boundary i_direct (N/S/W/E) at the discrete time level t (t=0: present; t>0: previous): ${\bf r}({\bf zeta})$ Note that the local coordinate zeta is a 1D Vector rather than a scalar – this is unavoidable because this function implements the pure virtual function in the Domain base class. More...

Private Member Functions
void	r_upper_body_N (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper body macro element zeta $\in [-1,1]$ . More...

void	r_upper_body_W (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper body macro element zeta $\in [-1,1]$ . More...

void	r_upper_body_S (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper body macro element zeta $\in [-1,1]$ . More...

void	r_upper_body_E (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper body macro element zeta $\in [-1,1]$ . More...

void	r_upper_fin_N (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper fin macro element zeta $\in [-1,1]$ . More...

void	r_upper_fin_W (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper fin macro element zeta $\in [-1,1]$ . More...

void	r_upper_fin_S (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper fin macro element zeta $\in [-1,1]$ . More...

void	r_upper_fin_E (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of upper fin macro element zeta $\in [-1,1]$ . More...

void	r_lower_body_N (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower body macro element zeta $\in [-1,1]$ . More...

void	r_lower_body_W (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower body macro element zeta $\in [-1,1]$ . More...

void	r_lower_body_S (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Southern boundary of lower body macro element zeta $\in [-1,1]$ . More...

void	r_lower_body_E (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower body macro element zeta $\in [-1,1]$ . More...

void	r_lower_fin_N (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower fin macro element zeta $\in [-1,1]$ . More...

void	r_lower_fin_W (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower fin macro element zeta $\in [-1,1]$ . More...

void	r_lower_fin_S (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower fin macro element zeta $\in [-1,1]$ . More...

void	r_lower_fin_E (const unsigned &t, const Vector< double > &zeta, Vector< double > &f)
	Boundary of lower fin macro element zeta $\in [-1,1]$ . More...

Private Attributes
double	Xi_nose
	"Nose" limit for the (1D) coordinates along the wall More...

double	Xi_tail
	"Tail" limit for the (1D) coordinates along the wall More...

double	X_fin
	X coordinate of fin tip. More...

double	Y_fin
	Y coordinate of fin tip. More...

double	X_mouth
	X coordinate of corner of mouth. More...

GeomObject *	Back_pt
	Pointer to the fish's back. More...

Detailed Description

Fish shaped domain, represented by four MacroElements. Shape is parametrised by GeomObject that represents the fish's back.

Definition at line 49 of file fish_domain.h.

Constructor & Destructor Documentation

◆ FishDomain() [1/2]

oomph::FishDomain::FishDomain	(	GeomObject *	back_pt,
		const double &	xi_nose,
		const double &	xi_tail
	)

inline

Constructor: Pass pointer to GeomObject that represents the (upper) curved boundary of the fish's body, and the start and end values of the Lagrangian coordinates along the GeomObject.

Definition at line 57 of file fish_domain.h.

References X_fin, X_mouth, and Y_fin.

◆ FishDomain() [2/2]

oomph::FishDomain::FishDomain ( const FishDomain & )

inline

Broken copy constructor.

Definition at line 82 of file fish_domain.h.

◆ ~FishDomain()

virtual oomph::FishDomain::~FishDomain ( )

inlinevirtual

Destructor for FishDomain: Kill macro elements.

Definition at line 96 of file fish_domain.h.

Member Function Documentation

◆ macro_element_boundary()

void oomph::FishDomain::macro_element_boundary	(	const unsigned &	t,
		const unsigned &	i_macro,
		const unsigned &	i_direct,
		const Vector< double > &	zeta,
		Vector< double > &	r
	)

Vector representation of the i_macro-th macro element boundary i_direct (N/S/W/E) at the discrete time level t (t=0: present; t>0: previous): ${\bf r}({\bf zeta})$ Note that the local coordinate zeta is a 1D Vector rather than a scalar – this is unavoidable because this function implements the pure virtual function in the Domain base class.

Vector representation of the imacro-th macro element boundary idirect (N/S/W/E) at time level t (t=0: present; t>0: previous): ${\bf r}({\bf zeta})$ Note that the local coordinate zeta is a 1D Vector rather than a scalar – this is unavoidable because this function implements the pure virtual function in the Domain base class.

Definition at line 301 of file fish_domain.h.

References r_lower_body_E(), r_lower_body_N(), r_lower_body_S(), r_lower_body_W(), r_lower_fin_E(), r_lower_fin_N(), r_lower_fin_S(), r_lower_fin_W(), r_upper_body_E(), r_upper_body_N(), r_upper_body_S(), r_upper_body_W(), r_upper_fin_E(), r_upper_fin_N(), r_upper_fin_S(), and r_upper_fin_W().

Referenced by xi_tail().

◆ operator=()

void oomph::FishDomain::operator= ( const FishDomain & )

inline

Broken assignment operator.

Definition at line 89 of file fish_domain.h.

◆ r_lower_body_E()

void oomph::FishDomain::r_lower_body_E	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower body macro element zeta $\in [-1,1]$ .

Definition at line 220 of file fish_domain.h.

References r_upper_body_E().

Referenced by macro_element_boundary().

◆ r_lower_body_N()

void oomph::FishDomain::r_lower_body_N	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower body macro element zeta $\in [-1,1]$ .

Definition at line 184 of file fish_domain.h.

References r_upper_body_S().

Referenced by macro_element_boundary().

◆ r_lower_body_S()

void oomph::FishDomain::r_lower_body_S	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Southern boundary of lower body macro element zeta $\in [-1,1]$ .

Definition at line 209 of file fish_domain.h.

References r_upper_body_N().

Referenced by macro_element_boundary().

◆ r_lower_body_W()

void oomph::FishDomain::r_lower_body_W	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower body macro element zeta $\in [-1,1]$ .

Definition at line 196 of file fish_domain.h.

References r_upper_body_W().

Referenced by macro_element_boundary().

◆ r_lower_fin_E()

void oomph::FishDomain::r_lower_fin_E	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower fin macro element zeta $\in [-1,1]$ .

Definition at line 270 of file fish_domain.h.

References r_upper_fin_E().

Referenced by macro_element_boundary().

◆ r_lower_fin_N()

void oomph::FishDomain::r_lower_fin_N	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower fin macro element zeta $\in [-1,1]$ .

Definition at line 234 of file fish_domain.h.

References r_upper_fin_S().

Referenced by macro_element_boundary().

◆ r_lower_fin_S()

void oomph::FishDomain::r_lower_fin_S	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower fin macro element zeta $\in [-1,1]$ .

Definition at line 259 of file fish_domain.h.

References r_upper_fin_N().

Referenced by macro_element_boundary().

◆ r_lower_fin_W()

void oomph::FishDomain::r_lower_fin_W	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

inlineprivate

Boundary of lower fin macro element zeta $\in [-1,1]$ .

Definition at line 246 of file fish_domain.h.

References r_upper_fin_W().

Referenced by macro_element_boundary().

◆ r_upper_body_E()

void oomph::FishDomain::r_upper_body_E	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper body macro element zeta $\in [-1,1]$ .

Eastern edge of upper body macro element; $\zeta \in [-1,1]$ .

Definition at line 594 of file fish_domain.h.

References Back_pt, and Xi_tail.

Referenced by macro_element_boundary(), and r_lower_body_E().

◆ r_upper_body_N()

void oomph::FishDomain::r_upper_body_N	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper body macro element zeta $\in [-1,1]$ .

Northern edge of upper body macro element; $\zeta \in [-1,1]$ .

Definition at line 574 of file fish_domain.h.

References Back_pt, Xi_nose, and Xi_tail.

Referenced by macro_element_boundary(), and r_lower_body_S().

◆ r_upper_body_S()

void oomph::FishDomain::r_upper_body_S	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper body macro element zeta $\in [-1,1]$ .

Southern edge of upper body macro element; $\zeta \in [-1,1]$ .

Definition at line 622 of file fish_domain.h.

References Back_pt, X_mouth, and Xi_tail.

Referenced by macro_element_boundary(), and r_lower_body_N().

◆ r_upper_body_W()

void oomph::FishDomain::r_upper_body_W	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper body macro element zeta $\in [-1,1]$ .

Western edge of upper body macro element; $\zeta \in [-1,1]$ .

Definition at line 644 of file fish_domain.h.

References Back_pt, X_mouth, and Xi_nose.

Referenced by macro_element_boundary(), and r_lower_body_W().

◆ r_upper_fin_E()

void oomph::FishDomain::r_upper_fin_E	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper fin macro element zeta $\in [-1,1]$ .

Eastern edge of upper fin macro element; $\zeta \in [-1,1]$ .

Definition at line 560 of file fish_domain.h.

References X_fin, and Y_fin.

Referenced by macro_element_boundary(), and r_lower_fin_E().

◆ r_upper_fin_N()

void oomph::FishDomain::r_upper_fin_N	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper fin macro element zeta $\in [-1,1]$ .

Northern edge of upper fin macro element; $\zeta \in [-1,1]$ .

Definition at line 485 of file fish_domain.h.

References Back_pt, X_fin, Xi_tail, and Y_fin.

Referenced by macro_element_boundary(), and r_lower_fin_S().

◆ r_upper_fin_S()

void oomph::FishDomain::r_upper_fin_S	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper fin macro element zeta $\in [-1,1]$ .

Southern edge of upper fin macro element; $\zeta \in [-1,1]$ .

Definition at line 538 of file fish_domain.h.

References Back_pt, and Xi_tail.

Referenced by macro_element_boundary(), and r_lower_fin_N().

◆ r_upper_fin_W()

void oomph::FishDomain::r_upper_fin_W	(	const unsigned &	t,
		const Vector< double > &	zeta,
		Vector< double > &	f
	)

private

Boundary of upper fin macro element zeta $\in [-1,1]$ .

Western edge of upper fin macro element; $\zeta \in [-1,1]$ .

Definition at line 515 of file fish_domain.h.

References Back_pt, and Xi_tail.

Referenced by macro_element_boundary(), and r_lower_fin_W().

◆ x_fin()

double& oomph::FishDomain::x_fin ( )

inline

x-position of fin tip

Definition at line 102 of file fish_domain.h.

References X_fin.

Referenced by oomph::AlgebraicFishMesh< ELEMENT >::node_update_in_fin().

◆ x_mouth()

double& oomph::FishDomain::x_mouth ( )

inline

x-position of mouth

Definition at line 108 of file fish_domain.h.

References X_mouth.

Referenced by oomph::AlgebraicFishMesh< ELEMENT >::node_update_in_body().

◆ xi_nose()

double& oomph::FishDomain::xi_nose ( )

inline

Start coordinate on wall (near nose)

Definition at line 111 of file fish_domain.h.

References Xi_nose.

Referenced by oomph::AlgebraicFishMesh< ELEMENT >::node_update_in_body(), and oomph::AlgebraicFishMesh< ELEMENT >::update_node_update().

◆ xi_tail()

double& oomph::FishDomain::xi_tail ( )

inline

End coordinate on wall (near tail)

Definition at line 114 of file fish_domain.h.

References macro_element_boundary(), and Xi_tail.

Referenced by oomph::AlgebraicFishMesh< ELEMENT >::node_update_in_body(), oomph::AlgebraicFishMesh< ELEMENT >::node_update_in_fin(), and oomph::AlgebraicFishMesh< ELEMENT >::update_node_update().

◆ y_fin()

double& oomph::FishDomain::y_fin ( )

inline

y-position of fin tip

Definition at line 105 of file fish_domain.h.

References Y_fin.

Referenced by oomph::AlgebraicFishMesh< ELEMENT >::node_update_in_fin().

Member Data Documentation

◆ Back_pt

GeomObject* oomph::FishDomain::Back_pt

private

Pointer to the fish's back.

Definition at line 147 of file fish_domain.h.

Referenced by r_upper_body_E(), r_upper_body_N(), r_upper_body_S(), r_upper_body_W(), r_upper_fin_N(), r_upper_fin_S(), and r_upper_fin_W().

◆ X_fin

double oomph::FishDomain::X_fin

private

X coordinate of fin tip.

Definition at line 138 of file fish_domain.h.

Referenced by FishDomain(), r_upper_fin_E(), r_upper_fin_N(), and x_fin().

◆ X_mouth

double oomph::FishDomain::X_mouth

private

X coordinate of corner of mouth.

Definition at line 144 of file fish_domain.h.

Referenced by FishDomain(), r_upper_body_S(), r_upper_body_W(), and x_mouth().

◆ Xi_nose

double oomph::FishDomain::Xi_nose

private

"Nose" limit for the (1D) coordinates along the wall

Definition at line 132 of file fish_domain.h.

Referenced by r_upper_body_N(), r_upper_body_W(), and xi_nose().

◆ Xi_tail

double oomph::FishDomain::Xi_tail

private

"Tail" limit for the (1D) coordinates along the wall

Definition at line 135 of file fish_domain.h.

Referenced by r_upper_body_E(), r_upper_body_N(), r_upper_body_S(), r_upper_fin_N(), r_upper_fin_S(), r_upper_fin_W(), and xi_tail().

◆ Y_fin

double oomph::FishDomain::Y_fin

private

Y coordinate of fin tip.

Definition at line 141 of file fish_domain.h.

Referenced by FishDomain(), r_upper_fin_E(), r_upper_fin_N(), and y_fin().

The documentation for this class was generated from the following file:

fish_domain.h

Public Member Functions

Private Member Functions

Private Attributes

Detailed Description

Constructor & Destructor Documentation

◆ FishDomain() [1/2]

◆ FishDomain() [2/2]

◆ ~FishDomain()

Member Function Documentation

◆ macro_element_boundary()

◆ operator=()

◆ r_lower_body_E()

◆ r_lower_body_N()

◆ r_lower_body_S()

◆ r_lower_body_W()

◆ r_lower_fin_E()

◆ r_lower_fin_N()

◆ r_lower_fin_S()

◆ r_lower_fin_W()

◆ r_upper_body_E()

◆ r_upper_body_N()

◆ r_upper_body_S()

◆ r_upper_body_W()

◆ r_upper_fin_E()

◆ r_upper_fin_N()

◆ r_upper_fin_S()

◆ r_upper_fin_W()

◆ x_fin()

◆ x_mouth()

◆ xi_nose()

◆ xi_tail()

◆ y_fin()

Member Data Documentation

◆ Back_pt

◆ X_fin

◆ X_mouth

◆ Xi_nose

◆ Xi_tail

◆ Y_fin